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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015908859.1_cds_XP_016459085.1_52648
CDS Infomation

[gene=LOC107782681] [db_xref=GeneID:107782681] [protein=cryptochrome DASH, chloroplastic/mitochondrial] [protein_id=XP_016459085.1] [location=complement(join(25032..25262,25378..25427,25526..25649,25789..25858,26069..26144,26330..26406,26573..26619,26715..26831,27437..27511,27605..27730,27837..28061,28179..28318,28641..29037))] [gbkey=CDS]
Sequence

ATGAATCTGAACGTGATGATCAAACCTCCTCTTTCTTTAACCAAACTCACTGCATCTTCT
TTAACATTCCACTGCAAATTCTCCAAAACCAATATGCATTCTTCTTTCAGTGCCAGAGCC
AGAGCCACACCCACTGTTCAAAATGTTCCAGAGCTAACCCCTGAAGAAATGGAAAGAGTT
TGTGAACAGACTTTTCAGAGATACACTAGTGTTAGTGGTTTGGCTAAGAGGAAAGGCAAA
GGGGTTGCAATTGTTTGGTTCAGGAATGACTTGAGAGTGTTGGATAATGAGGCTCTTTTT
AGAGCTTGGGTTTCATCTGAAGCAATATTGCCTGTTTATTGTGTTGATCCTACACTTTTT
GGGACTACCCATTTCTTTGGAATGCCCAAAACTGGAGCTTTAAGGGCGCAATTCATCATA
GAATCCTTAACCGATTTGAAAAGAAATCTAGTGAAGCGGGGACTTGACCTAATGATTCAA
CATGGTAAACCAGAAGAGATTATCCCTTCCCTTGCAAAAGCTTTTAAAGCACACACAGTG
TATGCCCACAAGGAAACATGCAGTGAGGAAGTAAAAGTAGAAAAAATGGTCACCAGAAAT
TTGCTAGAATTTGTACCACCAATATCTGGTGAACTAGGCAATGAGCCAAGATCTACAAAT
GCTACTAAACTGGAATTGATCTGGGGTGGTACTATGTATCATATAGATGACCTTCCATTT
GACTGTGAGAGTTTACCAGATGTGTACACTCAGTTCCGTAAGTCAGTGGAATCCAAATCA
AGAATCCGTAATTGCATTAGACTCCCAGCATCACTTGGTCCACCACCAGAGGTTGGAGAG
TGGGGATGTGTCCCACAAGTTACTGAGCTCGGGCTTCAGTCGGAAAAGGTTTCTAAAGGA
ATGAAGTTTATGGGAGGTGAAAGTGCTGCACTGGGTAGGGTACATGATTACTTTTGGAAG
AAGGATTTATTGAAAGTGTATAAAGTGACTCGAAATGGAATGTTAGGGCCTGATTATTCT
ACAAAGTTCTCTCCTTGGCTTGCTTCAGGATGCCTATCTCCCCGTTTTATATATGAAGAG
GTGAAGAGATACGAGAAGGAAAGACAATCAAATGATTCGACATACTGGGTTTTGTTTGAA
TTGATATGGAGGGATTACTTCAGATTTCTCTCAATCAAGCAAGGAAATTTGCTTTTTCAT
GCAGGTGGTCCCCGAAAAGTAGATATTAACTGGAGCCAAGACCAAACCATGTTTGATGCC
TGGAGACGAGGTCAAACTGGGTATCCTTTAATTGATGCCAACATGAAAGAACTAGCTTCT
ACTGGATTCATGTCGAATCGAGGGCGACAGATTGTGTGTTCTTTTCTTGTTCGAGATATG
GGCATTGACTGGCGGATGGGAGCTGAATGGTTTGAGACATGCCTCTTGGATTATGATCCT
TGCTCCAACTATGGAAACTGGACATATGGTGCAGGTGTTGGCAATGACCCTAGAGAAGAC
CGTTACTTCAGCATCCCGAAACAAGCTCAAAACTATGATCCCGAAGGGGAGTTTGTTGCA
TACTGGTTGCCAGAGCTAAGAGCACTTCCGAGGGAGAAAAGACATTCTCCCGGAATGATG
TACTTAAAGCCAATTGTTGCTCTCAAACATGGATACACCAAGAAGACTGGTGATTCGAAA
ATGGCATTTGCATCAAGAAGAGCCAAACCAGAAGACAATCGACGAAAGGGACAGGGAGAT
AGGAGAACGTATTAG

Peptide Sequence

PEP ID

XP_016459085.1
PEP Infomation

PREDICTED: cryptochrome DASH, chloroplastic/mitochondrial [Nicotiana tabacum]
Sequence

MNLNVMIKPPLSLTKLTASSLTFHCKFSKTNMHSSFSARARATPTVQNVPELTPEEMERV
CEQTFQRYTSVSGLAKRKGKGVAIVWFRNDLRVLDNEALFRAWVSSEAILPVYCVDPTLF
GTTHFFGMPKTGALRAQFIIESLTDLKRNLVKRGLDLMIQHGKPEEIIPSLAKAFKAHTV
YAHKETCSEEVKVEKMVTRNLLEFVPPISGELGNEPRSTNATKLELIWGGTMYHIDDLPF
DCESLPDVYTQFRKSVESKSRIRNCIRLPASLGPPPEVGEWGCVPQVTELGLQSEKVSKG
MKFMGGESAALGRVHDYFWKKDLLKVYKVTRNGMLGPDYSTKFSPWLASGCLSPRFIYEE
VKRYEKERQSNDSTYWVLFELIWRDYFRFLSIKQGNLLFHAGGPRKVDINWSQDQTMFDA
WRRGQTGYPLIDANMKELASTGFMSNRGRQIVCSFLVRDMGIDWRMGAEWFETCLLDYDP
CSNYGNWTYGAGVGNDPREDRYFSIPKQAQNYDPEGEFVAYWLPELRALPREKRHSPGMM
YLKPIVALKHGYTKKTGDSKMAFASRRAKPEDNRRKGQGDRRTY

Transcript Sequence

Gene sequence data has not been registered.